[molpro-user] memory settings in parallel runs
wangm9 at cardiff.ac.uk
Tue Nov 17 11:11:42 GMT 2009
Manuel Dömer wrote:
> Dear Molpro Users,
> I am running Molpro (2006.1) CCSD(T) calculations with large basis
> sets on an IBM P5 cluster with the LoadLeveler Batch System and I have
> run out of memory with my settings. After reading the sensible parts
> in both the Molpro and the LL description I am still a bit confused
> and would kindly ask for some advice.
> 1. the dynamical allocatable memory per task is given by the -m
> option. When the memory of one node is not enough I extend the number of
> nodes, but then I also need to specify the global array memory
> with the -G option. How can I find out whether I need more dynamical
> memory or more global memory?
global array memory -G option is no longer used in molpro, and you can
simply ignore it.
> 2. is there a way just to check the memory needs of a specific Molpro
> 3. when I run out of memory, is it a good idea (in terms of the memory
> problem, not the fact that I am wasting cpu time) to increase the
> amount of dynamical memory per task while reducing the number of
> tasks per node? Of course the total amount of dynamical memory stays
> the same in this way.
It is not possible to change the number of processes(tasks) during a
running parallel molpro job, although you can run it again with
different number of processes.
> 4. are the following warnings and error messages related to the
> dynamical memory (-m option) or to the global array memory (-G option)?
> Molecular orbitals read from record 2100.2 Type=RHF/CANONICAL
> (state 1.1)
> -10000: WARNING:armci_set_mem_offset: offset changed 0 to 29634560
> -10016: WARNING:armci_set_mem_offset: offset changed 0 to 29634560
> -10032: WARNING:armci_set_mem_offset: offset changed 0 to 29634560
> 3-fold multipass in aabb transformation; to avoid, increase memory
> NPASS IN TRSOR3 3
> ::: For minimal I/O algorithm in triples, increase memory by
> 356884442 words to 592.2 Mword
> ::: For full I/O caching in triples, increase memory by
> 1266559116 words to 1501.8 Mword
> ::: A further 142942592 words of memory are needed for the
> triples to run
> ::: Increase memory to 378.2 Mword
> GA ERROR fehler on processor 0
Please refer to previous post:
> I thank you very much in advance!
> Kind Regards,
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> Molpro-user at molpro.net
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